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  • Effects of gear modifications in a North Atlantic pelagic longline fishery: A multiyear study
    Publication . Lima, Françoise; Parra, Hugo; Alves, Rita B.; Santos, Marco A. R.; Bjorndal, Karen; Bolten, Alan B.; Vandeperre, Frederic
    The threat of population declines caused by pelagic longline fisheries in the Atlantic has increased the concern to find strategies that minimize the bycatch and mortality of non-target marine animals. Gear modification, such as the use of circle hooks instead of conventional J-hooks, has been identified as an effective bycatch reduction strategy in different pelagic longline fisheries around the world. This study aimed to verify the effectiveness of the use of circle hooks by quantifying catch rates, relative size selectivity, and anatomical hooking position for the most common target species (swordfish, Xiphias gladius, and blue shark, Prionace glauca), and some bycatch species (loggerhead sea turtles, Caretta caretta, and shortfin mako, Isurus oxyrinchus) caught by the Azorean longline fishing fleet. The trial was conducted for five consecutive years (2000–2004) using eight different types of hooks. In general, the blue shark catches using circle hooks were significantly higher compared to J (Mustad 9/0). The circle hooks also showed high probabilities of catching juvenile blue sharks. Conversely, the circle hooks were efficient in reducing the loggerhead sea turtle bycatch and were related to fewer catches of small sea turtle individuals. The use of circle hooks was also associated with reduced swordfish catches compared to J (Mustad 9/0), and the effect of hook types on length at capture was only significant for Circle (L. & P. 18/0 —CLP18) and Ringed Tuna (RT). No significant differences were observed comparing hook type to either catch rates or size selectivity for shortfin mako. Additionally, circle hooks were more likely to lodge in the mouth than in deeper anatomical positions, when compared to J (Mustad 9/0), for the four species analysed. The present study demonstrated that the use of circle hooks could mitigate the impact of the pelagic longline fisheries in the Azores by decreasing the bycatch of sea turtles and reducing animal injuries caused by deep hooking.
  • Unexpected appetitive events promote positive affective state in juvenile European sea bass
    Publication . Alvarado, M. V.; Felip, A.; Espigares, F.; Oliveira, Rui Filipe
    Some animal species exhibit considerable physiological and behavioural alterations in response to captivity. It has been hypothesized, but rarely tested, that such changes reflect a negative affective state that is associated to this specific context. In the last years, judgement bias measures have emerged as reliable indicators of animal affective state, under the assumption that individuals in a negative affective state are more likely to evaluate ambiguous stimuli as negative and display therefore pessimistic behaviours. Here, we have developed a judgement bias task for juvenile European sea bass (Dicentrarchus labrax) aiming to measure optimism/pessimism in this marine species, which have previously been reported to show important dysregulations in captive settings. Our results show that juvenile sea bass exhibit a considerable bias towards pessimistic behaviours in laboratory settings. Furthermore, juveniles that received an unexpected positive event during the judgement bias test displayed more optimistic responses toward ambiguous stimuli as compared to control fish, indicating a positive change in their affective state induced by the appetitive experience. These results reveal a direct interaction of the internal affective state with decision-making processing under ambiguity in juvenile European sea bass, highlighting therefore the potential of judgement bias tests as a tool for the advancement and improvement of our understanding of welfare in finfish aquaculture.
  • The fate of plastic litter within estuarine compartments: an overview of current knowledge for the transboundary issue to guide future assessments
    Publication . Pinheiro, L. M.; Agostini, V. O.; Lima, A. R. A.; Ward, R. D.; Pinho, G. L. L.
    Plastics can enter biogeochemical cycles and thus be found in most ecosystems. Most studies emphasize plastic pollution in oceanic ecosystems even though rivers and estuaries are acknowledged as the main sources of plastics to the oceans. This review detected few studies approaching the transboundary issue, as well as patterns of estuarine gradients in predicting plastic distribution and accumulation in water, sediments, and organisms. Quantities of plastics in estuaries reach up to 45,500 items m-3 in water, 567,000 items m-3 in sediment, and 131 items per individual in the biota. The role of rivers and estuaries in the transport of plastics to the ocean is far from fully understood due to small sample sizes, short-term approaches, sampling techniques that underestimate small plastics, and the use of site-specific sampling rather than covering environmental gradients. Microfibres are the most commonly found plastic type in all environmental matrices but efforts to re-calculate pathways using novel sampling techniques and estimates are incipient. Microplastic availability to estuarine organisms and rising/sinking is determined by polymer characteristics and spatio-temporal fluctuations in physicochemical, biological, and mineralogical factors. Key processes governing plastic contamination along estuarine trophic webs remain unclear, as most studies used "species" as an ecological unit rather than trophic/functional guilds and ontogenetic shifts in feeding behaviour to understand communities and intraspecific relationships, respectively. Efforts to understand contamination at the tissue level and the contribution of biofouling organisms as vectors of contaminants onto plastic surfaces are increasing. In conclusion, rivers and estuaries still require attention with regards to accurate sampling and conclusions. Multivariate analysis and robust models are necessary to predict the fate of micro- and macroplastics in estuarine environments; and the inclusion of the socio-economic aspects in modelling techniques seems to be relevant regarding management approaches.
  • Deliberate poisoning of Africa's vultures
    Publication . Henriques, Mohamed; Buij, Ralph; Monteiro, Hamilton; Sá, Joãozinho; Gomes Wambar, Francisco; Tavares, José Pedro; Botha, Andre; Citegetse, Geoffroy; Lecoq, Miguel; Catry, Paulo; Ogada, Darcy
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  • Social learning by mate‐choice copying increases dispersal and reduces local adaptation
    Publication . Sapage, Manuel; Varela, Susana.A.M.; Kokko, Hanna
    Abstract 1. In heterogeneous environments, dispersal may be hampered not only by direct costs, but also because immigrants may be locally maladapted. While maladaptation affects both sexes, this cost may be modulated in females if they express mate preferences that are either adaptive or maladaptive in the new local population. 2. Dispersal costs under local adaptation may be mitigated if it is possible to switch to expressing traits of locally adapted residents. In a sexual selection context, immigrant females may learn to mate with locally favoured males. Mate-choice copying is a type of social learning, where individuals, usually females, update their mating preferences after observing others mate. If it allows immigrant females to switch from maladapted to locally adapted preferences, their dispersal costs are mitigated as mate choice helps them create locally adapted offspring. 3. To study if copying can promote the evolution of dispersal, we created an individual- based model to simulate the coevolution of four traits: copying, dispersal, a trait relevant for local adaptation, and female preference. We contrast two scenarios with copying—either unconditional or conditional such that only dispersers copy—with a control scenario that lacks any copying. 4. We show copying to lead to higher dispersal, especially if copying is conditionally expressed. This leads to an increase in gene flow between patches and, consequently, a decrease in local adaptation and trait-preference correlations. 5. While our study is phrased with female preference as the learned trait, one may generally expect social learning to mitigate dispersal costs, with consequent feedback effects on the spatial dynamics of adaptation.
  • Forebrain transcriptional response to transient changes in circulating androgens in a cichlid fish
    Publication . Félix, Ana Sofia; D. Cardoso, Sara; Roleira, António; Oliveira, Rui Filipe
    It has been hypothesized that androgens respond to the social interactions as a way to adjust the behavior of individuals to the challenges of the social environment in an adaptive manner. Therefore, it is expected that transient changes in circulating androgen levels within physiological scope should impact the state of the brain network that regulates social behavior, which should translate into adaptive behavioral changes. Here, we examined the effect that a transient peak in androgen circulating levels, which mimics socially driven changes in androgen levels, has on the forebrain state, which harbors most nuclei of the social decision-making network. For this purpose, we successfully induced transient changes in circulating androgen levels in an African cichlid fish (Mozambique tilapia, Oreochromis mossambicus) commonly used as a model in behavioral neuroendocrinology by injecting 11-ketotestosterone or testosterone, and compared the forebrain transcriptome of these individuals to control fish injected with vehicle. Forebrain samples were collected 30 min and 60 min after injection and analyzed using RNAseq. Our results showed that a transient peak in 11-ketotestosterone drives more accentuated changes in forebrain transcriptome than testosterone, and that transcriptomic impact was greater at the 30 min than at the 60 min post-androgen administration. Several genes involved in the regulation of translation, steroid metabolism, ion channel membrane receptors, and genes involved in epigenetic mechanisms were differentially expressed after 11-ketotestosterone or testosterone injection. In summary, this study identified specific candidate genes that may regulate socially driven changes in behavioral flexibility mediated by androgens.
  • Sex‐specific telomere length and dynamics in relation to age and reproductive success in Cory's Shearwaters
    Publication . Bauch, Christina; Gatt, Marie Claire; Granadeiro, José Pedro; Verhulst, Simon; Catry, Paulo
    Individuals in free-living animal populations generally differ substantially in reproductive success, lifespan and other fitness-related traits and the molecular mechanisms underlying this variation are poorly understood. Telomere length and dynamics are candidate traits explaining this variation, as long telomeres predict a higher survival probability and telomere loss has been shown to reflect experienced "life stress". However, telomere dynamics among very long-lived species are unresolved. Additionally, it is generally not well understood how telomeres relate with reproductive success or sex. We measured telomere length and dynamics in erythrocytes to assess their relation to age, sex and reproduction in Cory's Shearwaters (Calonectris borealis), a long-lived seabird, in the context of a long-term study. Adult males had on average 231 bp longer telomeres than females independent of age. In females, telomere length changed relatively little with age, whereas male telomere length declined significantly. Telomere shortening within males from one year to the next was three times higher than the inter-annual shortening rate based on cross-sectional data of males. Past long-term reproductive success was sex-specifically reflected in age-corrected telomere length: males with on average high fledgling production were characterised by shorter telomeres, whereas successful females had longer telomeres and we discuss hypotheses that may explain this contrast. In conclusion, telomere length and dynamics in relation to age and reproduction are sex dependent in Cory's Shearwaters and these findings contribute to our understanding of what characterises individual variation in fitness.
  • Perceptual mechanisms of social affiliation in zebrafish
    Publication . Nunes, Ana Rita; Carreira, Leonor; Anbalagan, Savani; Blechman, Janna; Levkowitz, Gil; Oliveira, Rui Filipe
    Social living animals need to recognize the presence of conspecifics in the environment in order to engage in adaptive social interactions. Social cues can be detected through different sensory modalities, including vision. Two main visual features can convey information about the presence of conspecifics: body form and biological motion (BM). Given the role that oxytocin plays in social behavior regulation across vertebrates, particularly in the salience and reward values of social stimuli, we hypothesized that it may also be involved in the modulation of perceptual mechanisms for conspecific detection. Here, using videoplaybacks, we assessed the role of conspecific form and BM in zebrafish social affiliation, and how oxytocin regulates the perception of these cues. We demonstrated that while each visual cue is important for social attraction, BM promotes a higher fish engagement than the static conspecific form alone. Moreover, using a mutant line for one of the two oxytocin receptors, we show that oxytocin signaling is involved in the regulation of BM detection but not conspecific form recognition. In summary, our results indicate that, apart from oxytocin role in the regulation of social behaviors through its effect on higher-order cognitive mechanisms, it may regulate social behavior by modulating very basic perceptual mechanisms underlying the detection of socially-relevant cues.
  • A simple method using a single video camera to determine the three-dimensional position of a fish
    Publication . Pereira, Pedro; Oliveira, Rui Filipe
    In the present paper, we describe a method for recording the coordinates of a fish in an aquarium in a three-dimensional space, using a single video camera and a mirror. Weuse photogrammetic equations for this, considering the image obtained in the mirror as a virtual image obtained by a second camera. Atransformation of the coordinate system is required to express the obtained coordinates in an x, y, z system defined by the edges of the aquarium. The accuracy of the proposed method was estimated, and errors in extreme conditions were found to be 0.8% to 1.2 %, compared with the dimensions of the aquarium used in the test.
  • A new species of Calma Alder & Hancock, 1855 (Gastropoda: Nudibranchia) with a review of the genus
    Publication . Calado, Gonçalo; Urgorry, Victoriano
    This paper presents the description of a new species of the genus Calma (Alder & Hancock, 1855). To date only one valid species, Calma glaucoides (Alder & Hancock, 1854), has been assigned to this genus, which feeds exclusively upon eggs of littoral teleost fishes. New morphological and ecological data, and review of the literature on the species attributed to this genus, lead us to conclude that there are two distinct species previously put together under the same specific name. Calma gobioophaga new species is described based upon consistent morphological differences, such as the diameter and position of the eyes, the size of the propodial tentacles, and the size of the metanefridium. Whereas Calma gobioophaga feeds on spawn of Gobius niger, Calma glaucoides feeds on eggs of Lepadogaster lepadogaster, Lepadogaster purpurea, Lepadogaster candollei, Parablennius gattorugine, and Parablennius pilicornis.