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Multilocus phylogeny and systematics of Iberian endemic Squalius (Actinopterygii, Leuciscidae)

dc.contributor.authorPerea, Silvia
dc.contributor.authorSantos, Carla Sousa
dc.contributor.authorRobalo, Joana
dc.contributor.authorDoadrio, Ignacio
dc.date.accessioned2020-05-14T16:33:07Z
dc.date.available2021-01-01T01:30:09Z
dc.date.issued2020
dc.description.abstractInferring the evolutionary history of a group of species can be challenging given the many factors involved. In recent years, the increased availability of sequences of multiple genes per species has spurred the development of new methodologies to analyse multilocus data sets. Two approaches that analyse such data are concatenated supermatrix and coalescent-based species-tree analyses. In this study, we used both of these methods to infer the phylogenetic relationships of Iberian species of the genus Squalius from one mitochondrial and six nuclear genes. We found mitonuclear discordance in the phylogenetic relationships of the group. According to the mitochondrial gene analysis, all species were recovered as monophyletic except S. pyrenaicus; besides, in the concatenated supermatrix analysis of the nuclear markers, this species resolved as polyphyletic with three divergent evolutionary lineages. The coalescent-based nuclear species-tree analysis rendered a well-resolved phylogeny compared with the supermatrix analysis, which was unable to discern between S. carolitertii, S. castellanus and one of the evolutionary lineages of S. pyrenaicus. This result is likely due to the better integration of population uncertainty in the coalescent approach. Furthermore, Bayesian multilocus species delimitation analyses based on a BPP approach strongly supported the distinct nuclear lineages as different species. Nevertheless, the supermatrix analysis was able to obtain well-supported relationships in the divergent lineages with low numbers of individuals. Our study highlights the usefulness of different analytical methodologies to obtain a more complete picture of the evolutionary history of taxa, especially when discordant patterns among genes are found.pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.citationZoologica Scripta Doi:10.1111/zsc.12420pt_PT
dc.identifier.doi10.1111/zsc.12420pt_PT
dc.identifier.issn14636409
dc.identifier.urihttp://hdl.handle.net/10400.12/7594
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherBlackwell Publishing Inc.pt_PT
dc.subjectCoalescent species treept_PT
dc.subjectMitonuclear discordancept_PT
dc.subjectSqualiuspt_PT
dc.subjectSupermatrix concatenationpt_PT
dc.titleMultilocus phylogeny and systematics of Iberian endemic Squalius (Actinopterygii, Leuciscidae)pt_PT
dc.typejournal article
dspace.entity.typePublication
oaire.citation.conferencePlaceUnited Kingdompt_PT
oaire.citation.endPage18pt_PT
oaire.citation.startPage1pt_PT
oaire.citation.titleZoologica Scriptapt_PT
person.familyNamePerea
person.familyNameSousa Santos
person.familyNameRobalo
person.givenNameSilvia
person.givenNameCarla
person.givenNameJoana
person.identifierB-5385-2012
person.identifier.ciencia-idCF1E-F32A-BC15
person.identifier.ciencia-id1111-711D-31B2
person.identifier.ciencia-idD211-4FAD-537A
person.identifier.orcid0000-0003-0436-8577
person.identifier.orcid0000-0002-4513-5553
person.identifier.orcid0000-0002-7470-0574
person.identifier.ridA-7620-2018
person.identifier.ridN-9960-2014
person.identifier.scopus-author-id24462093800
person.identifier.scopus-author-id12769973800
person.identifier.scopus-author-id6506759340
rcaap.rightsopenAccesspt_PT
rcaap.typearticlept_PT
relation.isAuthorOfPublicationbc43319f-8ee7-4c74-b8dc-99f210f0bcda
relation.isAuthorOfPublication1640cf4b-0d35-4d3a-99e4-cc5a832dfaf8
relation.isAuthorOfPublicationd63f1a4f-73dd-4ef4-9b2f-9a3ba322097c
relation.isAuthorOfPublication.latestForDiscovery1640cf4b-0d35-4d3a-99e4-cc5a832dfaf8

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