PATTERNS OF POPULATION DIFFERENTIATION AND GENETIC DIVERSITY IN ESTUARINE VERSUS MARINE INSHORE FISH

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Home sweet home: evidence for nest-fidelity in the rocky intertidal fish, the shanny Lipophrys pholis

Publication . Martins, Joana; Almada, Frederico José Oliveira de; Gonçalves, Ana Sofia Ribeiro; Coelho, Pedro Duarte; Jorge, Paulo

The ability to be faithful to a particular area or site was analysed in the shanny Lipophrys pholis. Using passive integrated transponders, adults from a population of L. pholis at Cabo Raso, Portugal, were followed over a period of 3 years. The findings showed that site fidelity is a consistent behaviour during the breeding season with specific breeding males being found only in particular sectors within the area, and in specific nests throughout the years. The fact that, in general, L. pholis individuals were absent from the study area during the non-breeding season and breeding males were recorded returning to the same nests and sectors for consecutive breeding seasons suggests that they have developed excellent homing abilities. Translocation data corroborate this idea showing that breeding males successfully returned to their nests after a displacement of >100 m. Altogether, these findings highlight the relevance of life-history traits (e.g. nesting) in the conditioning of site fidelity and homing for this species of rocky intertidal fish, and more importantly, provide evidence for the need of a well-developed navigational system.

2016Journal article

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Identification of adult and juvenile Atherina presbyter Cuvier, 1829 in a marine coastal area adjacent to Tagus estuary (NE Atlantic): A molecular tool for an ecological question

Publication . Almada, Frederico José Oliveira de; Carpi, Piera; Carlos, Fábio Ferreira; Francisco, Sara Martins; Faria, Ana Margarida; Lungu, Ruxanda; Coelho, Pedro Duarte; Neto, José; Gonçalves, Emanuel João; Robalo, Joana Isabel

A simple PCR-RFLP consisting in the digestion of a fragment of the 12S ribosomal RNA (12SrRNA) with species-specific restriction enzymes (MboII and HinfI) was developed to distinguish northeastern Atlantic species in the genus Atherina. Unambiguous identification of morphologically similar sympatric species is frequently difficult, especially when younger specimens are included in the analysis. Genetic and morphological analysis of a total of 123 atherinids collected near the mouth of the Tagus estuary (west Portugal) confirmed that only Atherina presbyter (sand smelt) adults and juveniles are recurrently using these marine rocky habitats as spawning and nursery grounds, respectively. The importance of applying non-destructive methods is emphasized. In the future, the conditions involved in the transition from marine A. presbyter to estuarine/ riverine A. boyeri should be further evaluated along with the ability of larvae and juveniles to cope with river flow and tidal currents drift.

2017Journal article

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On the absence of genetic differentiation between morphotypes of the ballan wrasse Labrus bergylta (Labridae)

Publication . Almada, Frederico José Oliveira de; Casas, Laura; Francisco, Sara Martins; Villegas-Ríos, David; Saborido-Rey, Fran; Irigoien, Xabier; Robalo, Joana Isabel

The ballan wrasse, Labrus bergylta (Labridae), is a protogynous hermaphrodite fish common in the north-eastern Atlantic from Norway to Morocco. It is a commercially important resource for local fisheries and is currently being used as cleaner fish to control sea lice in salmon farms in northern Europe. Two distinct colour patterns have been recently reported in the literature: plain and spotted. These individuals follow strikingly different life history strategies raising the question of whether they represent one or two independent taxonomic units. Analyses of mitochondrial (18S, COI and control region) and nuclear (S7) markers revealed no genetic differences between these morphotypes. Alternative explanations for the origin and persistence of distinct morphotypes are discussed.

2016Journal article

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Not so sluggish : The success of the Felimare picta complex (Gastropoda, Nudibranchia) crossing Atlantic biogeographic barriers

Publication . Almada, Frederico José Oliveira de; Levy, André; Robalo, Joana Isabel

The molecular phylogeny of the Atlanto-Mediterranean species of the genus Felimare, particularly those attributed to the species F. picta, was inferred using two mitochondrial markers (16S and COI). A recent revision of the Chromodorididae clarified the taxonomic relationships at the family level redefining the genus Felimare. However, conflicting taxonomic classifications have been proposed for a restrict group of taxa with overlapping morphological characteristics and geographical distributions designated here as the Felimare picta complex. Three major groups were identified: one Mediterranean and amphi-Atlantic group; a western Atlantic group and a tropical eastern Atlantic group. F. picta forms a paraphyletic group since some subspecies are more closely related with taxa traditionaly classified as independent species (e.g. F. zebra) than with other subspecies with allopatric distributions (e.g. F. picta picta and F. picta tema). Usually, nudibranchs have adhesive demersal eggs, short planktonic larval phases and low mobility as adults unless rafting on floating materials occurs. Surprisingly however, the phylogeny of the F. picta complex suggests that they successfully cross main Atlantic biogeographic barriers including the mid-Atlantic barrier. This ability to cross different biogeographic barriers may be related to F. picta's distinct life history and ecological traits. Compared to other Chromodorididae F. picta has larger eggs and planktotrophic larvae which could be related to a longer planktonic phase.

2016Journal article

Open access

Historical gene flow constraints in a northeastern atlantic fish: Phylogeography of the ballan wrasse labrus bergylta across its distribution range

Publication . Almada, Frederico José Oliveira de; Francisco, Sara Martins; Lima, Cristina Silva; Fitzgerald, Richard; Mirimin, Luca; Villegas-Ríos, David; Saborido-Rey, Fran; Afonso, Pedro; Morato, Telmo; Bexiga, Sérgio; Robalo, Joana Isabel

The distribution and demographic patterns of marine organisms in the north Atlantic were largely shaped by climatic changes during the Pleistocene, when recurrent glacial maxima forced them to move south or to survive in northern peri-glacial refugia. These patterns were also influenced by biological and ecological factors intrinsic to each species, namely their dispersion ability. The ballan wrasse (Labrus bergylta), the largest labrid fish along Europe's continental margins, is a target for fisheries and aquaculture industry. The phylogeographic pattern, population structure, potential glacial refugia and recolonization routes for this species were assessed across its full distribution range, using mitochondrial and nuclear markers. The existence of a marked population structure can reflect both recolonization from three distinct glacial refugia and current and past oceanographic circulation patterns. Although isolated in present times, shared haplotypes between continental and Azores populations and historical exchange of migrants in both directions point to a common origin of L. bergylta. This situation is likely to be maintained and/or accentuated by current circulation patterns in the north Atlantic, and may lead to incipient speciation in the already distinct Azorean population. Future monitoring of this species is crucial to evaluate how this species is coping with current environmental changes.

2017Journal article

Open access